STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_4591MaoC family protein. (157 aa)    
Predicted Functional Partners:
BC_5004
Enoyl-CoA hydratase.
  
 0.700
BC_4593
Isocitrate dehydrogenase (NADP).
  
 0.690
BC_0863
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.616
BC_1155
Catalase; Belongs to the catalase family.
   
 0.616
BC_3008
Catalase.
   
 0.616
citZ
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.587
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
  
 0.578
birA
Biotin operon repressor / Biotin--[acetyl-CoA-carboxylase] synthetase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
  
 0.534
BC_5035
Phenylacetic acid degradation protein paaD.
  
  
 0.527
BC_2288
Acyl-CoA dehydrogenase.
  
 0.496
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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