Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BC_4591MaoC family protein. (157 aa)    
Predicted Functional Partners:
BC_4593
Isocitrate dehydrogenase (NADP).
  
  0.794
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 
 0.754
citZ
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.724
BC_5004
Enoyl-CoA hydratase.
  
 0.669
BC_0863
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.610
BC_1155
Catalase; Belongs to the catalase family.
   
 0.610
BC_3008
Catalase.
   
 0.610
BC_5341
Acyl-CoA dehydrogenase, short-chain specific.
  
 0.591
BC_4588
Phosphate regulon sensor protein phoR.
       0.587
BC_4589
Alkaline phosphatase synthesis two-component response regulator phoP.
       0.587
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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