STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_4837ABC transporter permease protein. (659 aa)    
Predicted Functional Partners:
BC_4838
ABC transporter permease protein.
 
   
0.933
BC_4839
ABC transporter ATP-binding protein.
 
 
 0.926
BC_4836
Two component system histidine kinase.
 
 
 0.902
BC_4835
Two-component response regulator.
 
    0.875
BC_2543
ABC transporter ATP-binding protein.
 
 
 0.839
BC_4824
ABC transporter ATP-binding protein.
 
 
 0.836
BC_4431
ABC transporter ATP-binding protein.
 
 
 0.835
BC_4831
ABC transporter ATP-binding protein.
 
 
 0.817
BC_2539
Two-component sensor kinase yxdK.
 
 
 0.795
BC_4743
ABC transporter ATP-binding protein.
 
 
 0.788
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.