STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_4980IscU protein. (143 aa)    
Predicted Functional Partners:
BC_4981
Cysteine desulfhydrase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
 0.999
sufD
ABC transporter-associated protein.
 
  
 0.995
sufC
ABC transporter ATP-binding protein.
 
  
 0.991
sufB
ABC transporter-associated protein.
 
  
 0.979
BC_4392
Cysteine desulfhydrase.
 
 0.976
BC_4648
Cysteine desulfhydrase.
 
 0.976
BC_4424
Cysteine desulfhydrase.
 
 0.975
BC_2795
Ferredoxin.
  
 0.970
dnaK
Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 
 0.866
BC_4935
HESB protein; Belongs to the HesB/IscA family.
 
  
 0.853
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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