Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BC_5046 | BC_5047 | BC_5046 | BC_5047 | Lysine decarboxylase family; Belongs to the LOG family. | IG hypothetical 16995. | 0.754 |
BC_5046 | BC_5048 | BC_5046 | BC_5048 | Lysine decarboxylase family; Belongs to the LOG family. | Ferritin; Iron-storage protein. | 0.489 |
BC_5046 | miaA | BC_5046 | BC_3714 | Lysine decarboxylase family; Belongs to the LOG family. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.402 |
BC_5046 | nrdE | BC_5046 | BC_1354 | Lysine decarboxylase family; Belongs to the LOG family. | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.528 |
BC_5046 | nrdF | BC_5046 | BC_1355 | Lysine decarboxylase family; Belongs to the LOG family. | Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.523 |
BC_5046 | prmC | BC_5046 | BC_5328 | Lysine decarboxylase family; Belongs to the LOG family. | Methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.618 |
BC_5047 | BC_5046 | BC_5047 | BC_5046 | IG hypothetical 16995. | Lysine decarboxylase family; Belongs to the LOG family. | 0.754 |
BC_5047 | BC_5048 | BC_5047 | BC_5048 | IG hypothetical 16995. | Ferritin; Iron-storage protein. | 0.682 |
BC_5048 | BC_5046 | BC_5048 | BC_5046 | Ferritin; Iron-storage protein. | Lysine decarboxylase family; Belongs to the LOG family. | 0.489 |
BC_5048 | BC_5047 | BC_5048 | BC_5047 | Ferritin; Iron-storage protein. | IG hypothetical 16995. | 0.682 |
miaA | BC_5046 | BC_3714 | BC_5046 | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | Lysine decarboxylase family; Belongs to the LOG family. | 0.402 |
nrdE | BC_5046 | BC_1354 | BC_5046 | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Lysine decarboxylase family; Belongs to the LOG family. | 0.528 |
nrdE | nrdF | BC_1354 | BC_1355 | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.999 |
nrdF | BC_5046 | BC_1355 | BC_5046 | Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | Lysine decarboxylase family; Belongs to the LOG family. | 0.523 |
nrdF | nrdE | BC_1355 | BC_1354 | Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.999 |
prmC | BC_5046 | BC_5328 | BC_5046 | Methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | Lysine decarboxylase family; Belongs to the LOG family. | 0.618 |