Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
BC_5083Lantibiotic biosynthesis protein. (323 aa)    
Predicted Functional Partners:
BC_5084
Lanthionine biosynthesis protein.
 
    0.991
BC_5085
Hypothetical Cytosolic Protein.
 
  
 0.986
BC_5079
Short chain dehydrogenase.
  
   0.966
BC_5082
Hypothetical protein.
  
    0.965
BC_5080
Methyltransferase.
 
    0.951
BC_5081
NADH oxidase (NOXASE).
 
    0.858
BC_5122
Hypothetical Cytosolic Protein.
 
  
 0.755
BC_5086
Putative lantibiotic biosynthesis protein.
  
  
 0.647
BC_2442
Transcriptional regulator, LuxR family.
  
     0.635
birA
Biotin operon repressor / Biotin--[acetyl-CoA-carboxylase] synthetase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.587
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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