STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_5274UDP-N-acetylglucosamine 4,6-dehydratase. (593 aa)    
Predicted Functional Partners:
BC_5273
UDP-bacillosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.968
BC_1944
Lipopolysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.902
BC_5279
Tyrosine-protein kinase (capsular polysaccharide biosynthesis).
 
  
 0.826
BC_5270
Undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.796
BC_5278
Chain length regulator (capsular polysaccharide biosynthesis).
 
  
 0.769
BC_5271
UDP-N-acetylglucosamine 4-epimerase.
  
  
 0.753
BC_5276
Phosphotyrosine-protein phosphatase (capsular polysaccharide biosynthesis).
 
  
 0.747
BC_1583
O-acetyl transferase.
     
 0.733
BC_5272
Carbamoyl-phosphate synthase small chain.
 
    0.731
BC_1708
Hypothetical protein.
  
  
 0.718
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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