Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BC_0773 | BC_5335 | BC_0773 | BC_5335 | Fructokinase. | Fructose-bisphosphate aldolase. | 0.499 |
BC_0773 | glpX | BC_0773 | BC_4962 | Fructokinase. | Fructose-1,6-bisphosphatase. | 0.905 |
BC_0773 | glpX-2 | BC_0773 | BC_5333 | Fructokinase. | Fructose-1,6-bisphosphatase. | 0.906 |
BC_0773 | pfkA | BC_0773 | BC_4600 | Fructokinase. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.920 |
BC_0773 | pgi | BC_0773 | BC_4898 | Fructokinase. | Glucose-6-phosphate isomerase. | 0.924 |
BC_0773 | tal2 | BC_0773 | BC_3371 | Fructokinase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.403 |
BC_5335 | BC_0773 | BC_5335 | BC_0773 | Fructose-bisphosphate aldolase. | Fructokinase. | 0.499 |
BC_5335 | glpX | BC_5335 | BC_4962 | Fructose-bisphosphate aldolase. | Fructose-1,6-bisphosphatase. | 0.929 |
BC_5335 | glpX-2 | BC_5335 | BC_5333 | Fructose-bisphosphate aldolase. | Fructose-1,6-bisphosphatase. | 0.946 |
BC_5335 | murA2 | BC_5335 | BC_5334 | Fructose-bisphosphate aldolase. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.564 |
BC_5335 | pfkA | BC_5335 | BC_4600 | Fructose-bisphosphate aldolase. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.987 |
BC_5335 | pfkB | BC_5335 | BC_3719 | Fructose-bisphosphate aldolase. | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. | 0.970 |
BC_5335 | pgi | BC_5335 | BC_4898 | Fructose-bisphosphate aldolase. | Glucose-6-phosphate isomerase. | 0.980 |
BC_5335 | tal1 | BC_5335 | BC_0665 | Fructose-bisphosphate aldolase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.951 |
BC_5335 | tal2 | BC_5335 | BC_3371 | Fructose-bisphosphate aldolase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.951 |
BC_5335 | tkt | BC_5335 | BC_3682 | Fructose-bisphosphate aldolase. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.972 |
glpX | BC_0773 | BC_4962 | BC_0773 | Fructose-1,6-bisphosphatase. | Fructokinase. | 0.905 |
glpX | BC_5335 | BC_4962 | BC_5335 | Fructose-1,6-bisphosphatase. | Fructose-bisphosphate aldolase. | 0.929 |
glpX | glpX-2 | BC_4962 | BC_5333 | Fructose-1,6-bisphosphatase. | Fructose-1,6-bisphosphatase. | 0.902 |
glpX | murA2 | BC_4962 | BC_5334 | Fructose-1,6-bisphosphatase. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.717 |
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