STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIH86110.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
metG
Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.670
KIH81056.1
Putrescine utilization regulator; Icw(1);GABA_and_putrescine_metabolism_from_cluters idu(1);Putrescine_utilization_pathways.
  
 0.595
KIH86109.1
Periplasmic chorismate mutase I precursor; Catalyzes the Claisen rearrangement of chorismate to prephenate.
       0.517
KIH86111.1
Isu;Glutamine,_Glutamate,_Aspartate_and_Asparagine_ Biosynthesis isu;Peptidoglycan_Biosynthesis isu;Ammonia_assimilation isu;Glutamine_synthetases.
  
    0.475
KIH82910.1
3-carboxy-cis,cis-muconate cycloisomerase; Icw(3);Protocatechuate_branch_of_beta- ketoadipate_pa thway.
    
 0.453
KIH82786.1
Adenylosuccinate lyase; Isu;Purine_conversions icw(1);CBSS-354.1.peg.876 isu;De_Novo_Purine_Biosynthesis; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
 0.453
KIH85884.1
Mannose-1-phosphate guanylyltransferase (GDP); Isu;Mannose_Metabolism; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  0.444
KIH80578.1
Putative glycosyltransferase.
  
     0.443
KIH82412.1
Chorismate mutase I / Prephenate dehydratase; Icw(1);Chorismate_Synthesis icw(1);Chorismate_Synthesis isu;Phenylalanine_and_Tyrosine_Branches_from_Chorismate isu;Phenylalanine_and_Tyrosine_Branches_from_Chorismate.
  
 
 0.440
KIH85657.1
NikM protein.
  
     0.431
Your Current Organism:
Pseudomonas batumici
NCBI taxonomy Id: 226910
Other names: P. batumici, strain UCM B-321
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