STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIH85410.1Two-component sensor CbrB: intrcellular carbon:nitrogen balance. (476 aa)    
Predicted Functional Partners:
KIH81257.1
Sensory box/GGDEF family protein.
  
0.952
KIH85411.1
Two-component sensor CbrA: intrcellular carbon:nitrogen balance.
 
 
 0.928
KIH86106.1
Nitrogen regulation protein NtrB; Icw(1);Possible_RNA_degradation_cluster.
 0.898
KIH83673.1
Histidine kinase/response regulator hybrid protein.
 
 0.878
KIH85320.1
RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.877
KIH84935.1
Sensor histidine kinase/response regulator.
 
 0.866
KIH83344.1
Signal transduction histidine kinase.
  
 0.866
KIH84324.1
Putative sensor/response regulator hybrid.
  
 0.855
KIH81886.1
Putative sensor/response regulator hybrid.
  
 0.855
KIH83727.1
Hypothetical protein.
  
 0.852
Your Current Organism:
Pseudomonas batumici
NCBI taxonomy Id: 226910
Other names: P. batumici, strain UCM B-321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.