STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIH84773.1Beta-ketoadipyl CoA thiolase; Icw(3);Chloroaromatic_degradation_pathway icw(3);Protocatechuate_branch_of_beta-ketoadipate_pathway; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)    
Predicted Functional Partners:
fadB
Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
 0.998
KIH82523.1
3-hydroxybutyryl-CoA dehydrogenase; Icw(1);Polyhydroxybutyrate_metabolism idu(1);Lysine_fermentation idu(1);Butanol_Biosynthesis idu(1);Acetyl-CoA_fermentation_to_Butyrate.
 0.977
KIH86009.1
BatC, batumin synthesis operon, 3-hydroxy-3methylglutaryl CoA synthase; Isu;Archaeal_lipids isu;Isoprenoid_Biosynthesis isu;Ketoisovalerate_oxidoreductase icw(1);Leucine_Degradation_and_HMG-CoA_Metabolism.
  
 0.973
KIH84771.1
Glutaconate CoA-transferase subunit B; Icw(1);Catechol_branch_of_beta-ketoadipate_pathway icw(1);Chloroaromatic_degradation_pathway icw(1);Protocatechuate_branch_of_beta-ketoadipate_pathway.
 
 
 0.968
KIH84772.1
Glutaconate CoA-transferase subunit B; Isu;Catechol_branch_of_beta-ketoadipate_pathway isu;Chloroaromatic_degradation_pathway isu;Protocatechuate_branch_of_beta-ketoadipate_pathway.
 
 
 0.967
KIH86004.1
Bat1, batumin synthesis operon, polyketide synthase of type I.
  
 0.958
lcdH
Carnitine 3-dehydrogenase, 3-hydroxybutyryl-CoA dehydrogenase, 3-hydroxyacyl-CoA dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.
 
 0.932
KIH84288.1
Enoyl-CoA hydratase/isomerase family protein.
  
 0.929
KIH82602.1
Enoyl-CoA hydratase (valine degradation); Idu(1);Valine_degradation.
  
 0.913
KIH83944.1
Enoyl-CoA hydratase; Idu(6);n-Phenylalkanoic_acid_degradation idu(6);Polyhydroxybutyrate_metabolism idu(6);Isoleucine_degradation idu(6);Fatty_acid_metabolism_cluster idu(6);Butyrate_metabolism_cluster idu(6);Lysine_fermentation idu(6);Butanol_Biosynthesis idu(6);Acetyl-CoA_fermentation_to_Butyrate idu(6);Valine_degradation; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.910
Your Current Organism:
Pseudomonas batumici
NCBI taxonomy Id: 226910
Other names: P. batumici, strain UCM B-321
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