STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIH84195.1Cyanate transport protein CynX; Idu(1);Cyanate_hydrolysis. (396 aa)    
Predicted Functional Partners:
KIH85088.1
UPF0246 protein YaaA; Belongs to the UPF0246 family.
  
    0.729
KIH84196.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.543
KIH84194.1
Putative membrane fusion protein (MFP) component of efflux pump, membrane anchor protein YbhG.
  
    0.535
KIH85914.1
Flagellar basal-body rod protein FlgG; Icw(5);Flagellum; Belongs to the flagella basal body rod proteins family.
   
   0.502
KIH85135.1
Glucosamine-6-phosphate deaminase (isomerizing), alternative; Icw(1);Chitin_and_N-acetylglucosamine_utilization.
  
    0.463
KIH84785.1
Putative sugar transport protein.
  
    0.400
Your Current Organism:
Pseudomonas batumici
NCBI taxonomy Id: 226910
Other names: P. batumici, strain UCM B-321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.