STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIH84212.1Isu;Phage_capsid_proteins. (153 aa)    
Predicted Functional Partners:
KIH84210.1
Icw(2);Phage_capsid_proteins.
 
  
 0.996
KIH84211.1
Phage terminase, endonuclease subunit.
 
    0.996
KIH84209.1
Icw(1);Phage_capsid_proteins.
 
    0.995
KIH84217.1
Icw(1);Phage_tail_proteins.
 
    0.994
KIH84218.1
Isu;Phage_tail_proteins isu;Phage_tail_proteins_2.
 
  
 0.994
KIH84208.1
Phage terminase, ATPase subunit.
 
    0.993
KIH84207.1
Phage-related capsid packaging protein.
 
    0.992
KIH84227.1
Hypothetical protein.
 
    0.991
KIH84230.1
Icw(1);Phage_tail_proteins.
 
    0.990
KIH84216.1
Isu;Phage_lysis_modules.
  
    0.973
Your Current Organism:
Pseudomonas batumici
NCBI taxonomy Id: 226910
Other names: P. batumici, strain UCM B-321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.