STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIH84110.1Aldehyde dehydrogenase; Idu(12);Pyruvate_metabolism_II:_acetyl-CoA,_acetoge nesis_from_pyruvate icw(1);Glycerolipid_and_Glycerophospholipid_Metabolism_in_ B acteria idu(12);Methylglyoxal_Metabolism; Belongs to the aldehyde dehydrogenase family. (463 aa)    
Predicted Functional Partners:
KIH84109.1
Alcohol dehydrogenase; Idu(5);5-FCL-like_protein idu(5);Glycerolipid_and_Glycerophospholipid_Metabolism_in_ B acteria idu(5);Fermentations:_Mixed_acid idu(5);Butanol_Biosynthesis.
 0.959
KIH84111.1
Glutamine synthetase family protein; Idu(3);Glutamine,_Glutamate,_Aspartate_and_Asparagi ne_Biosynthesis; Belongs to the glutamine synthetase family.
 
 
 0.932
KIH83872.1
Long-chain-fatty-acid--CoA ligase; Idu(19);n-Phenylalkanoic_acid_degradation idu(19);Fatty_acid_metabolism_cluster idu(19);Biotin_synthesis_cluster idu(19);Biotin_biosynthesis.
  
 0.882
KIH86030.1
BatY, batumin synthesis operon, long-chain-fatty-acid--CoA ligase; Idu(19);n-Phenylalkanoic_acid_degradation idu(19);Fatty_acid_metabolism_cluster idu(19);Biotin_synthesis_cluster idu(19);Biotin_biosynthesis.
  
 0.874
KIH84069.1
Long-chain-fatty-acid--CoA ligase; Idu(19);n-Phenylalkanoic_acid_degradation idu(19);Fatty_acid_metabolism_cluster idu(19);Biotin_synthesis_cluster idu(19);Biotin_biosynthesis.
    
 0.832
KIH85622.1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
 
0.822
KIH85732.1
Glutamate synthase (NADPH) large chain; Isu;Glutamine,_Glutamate,_Aspartate_and_Asparagine_ Biosynthesis isu;Ammonia_assimilation.
  
 
 0.801
KIH82544.1
Acyl-CoA dehydrogenase, short-chain specific.
  
 0.782
KIH86004.1
Bat1, batumin synthesis operon, polyketide synthase of type I.
  
 0.775
KIH85194.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.767
Your Current Organism:
Pseudomonas batumici
NCBI taxonomy Id: 226910
Other names: P. batumici, strain UCM B-321
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