STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIH83731.1Spermidine/putrescine-binding periplasmic protein. (367 aa)    
Predicted Functional Partners:
KIH84717.1
Polyamine ABC transporter, permease protein.
 
 0.963
potA
Putrescine transport ATP-binding protein PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.953
KIH85171.1
Spermidine Putrescine ABC transporter permease component potC; Icw(3);Polyamine_Metabolism.
 
 0.947
KIH80696.1
Putrescine transport system permease protein PotH; Isu;GABA_and_putrescine_metabolism_from_cluters isu;Polyamine_Metabolism.
 
 
 0.943
KIH85792.1
ABC-type spermidine/putrescine transport system, permease component II.
 
 0.936
KIH85172.1
Spermidine Putrescine ABC transporter permease component PotB; Icw(4);Polyamine_Metabolism.
 
 
 0.929
KIH84718.1
Spermidine Putrescine ABC transporter permease component PotB; Idu(1);Polyamine_Metabolism.
 
 
 0.929
KIH85791.1
ABC-type spermidine/putrescine transport system, permease component I.
 
 
 0.925
KIH84819.1
ABC spermidine/putrescine transporter, inner membrane subunit.
 
 
 0.923
KIH84820.1
ABC spermidine/putrescine transporter, inner membrane subunit.
 
 0.887
Your Current Organism:
Pseudomonas batumici
NCBI taxonomy Id: 226910
Other names: P. batumici, strain UCM B-321
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