STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIH83505.1Idu(6);Quinone_oxidoreductase_family. (341 aa)    
Predicted Functional Partners:
KIH86004.1
Bat1, batumin synthesis operon, polyketide synthase of type I.
 
 0.957
KIH82546.1
3-oxoacyl-(acyl-carrier-protein) synthase, KASII; Idu(3);Fatty_Acid_Biosynthesis_FASII; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
   
 0.924
KIH86030.1
BatY, batumin synthesis operon, long-chain-fatty-acid--CoA ligase; Idu(19);n-Phenylalkanoic_acid_degradation idu(19);Fatty_acid_metabolism_cluster idu(19);Biotin_synthesis_cluster idu(19);Biotin_biosynthesis.
 
 0.922
KIH84069.1
Long-chain-fatty-acid--CoA ligase; Idu(19);n-Phenylalkanoic_acid_degradation idu(19);Fatty_acid_metabolism_cluster idu(19);Biotin_synthesis_cluster idu(19);Biotin_biosynthesis.
 
 0.909
KIH86005.1
Idu(5);Fatty_Acid_Biosynthesis_FASII.
 
 0.904
KIH83872.1
Long-chain-fatty-acid--CoA ligase; Idu(19);n-Phenylalkanoic_acid_degradation idu(19);Fatty_acid_metabolism_cluster idu(19);Biotin_synthesis_cluster idu(19);Biotin_biosynthesis.
  
 0.902
KIH86006.1
Bat3, batumin synthesis operon, polyketide synthase, Malonyl CoA-acyl carrier protein transacylase; Idu(5);Fatty_Acid_Biosynthesis_FASII; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.825
KIH82544.1
Acyl-CoA dehydrogenase, short-chain specific.
  
 0.788
KIH85194.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.767
KIH80741.1
Pyruvate carboxyl transferase subunit B; Icw(1);Pyruvate_metabolism_I:_anaplerotic_reactions , _PEP.
    
 0.767
Your Current Organism:
Pseudomonas batumici
NCBI taxonomy Id: 226910
Other names: P. batumici, strain UCM B-321
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