Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KIH83257.1Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (300 aa)    
Predicted Functional Partners:
KIH83143.1
LysR family transcriptional regulator YnfL; Idu(2);LysR-family_proteins_in_Escherichia_coli idu(2);LysR- family_proteins_in_Salmonella_enterica_Typhimur ium; Belongs to the LysR transcriptional regulatory family.
  
     0.744
KIH80902.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.737
KIH82914.1
LysR family transcriptional regulator YdcI; Isu;LysR-family_proteins_in_Escherichia_coli isu;LysR- family_proteins_in_Salmonella_enterica_Typhimurium; Belongs to the LysR transcriptional regulatory family.
  
     0.700
KIH83898.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.688
KIH81353.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.653
KIH83722.1
LysR family transcriptional regulator lrhA; Isu;LysR-family_proteins_in_Escherichia_coli isu;LysR- family_proteins_in_Salmonella_enterica_Typhimurium; Belongs to the LysR transcriptional regulatory family.
  
     0.638
KIH84627.1
Cyn operon transcriptional activator; Idu(3);LysR-family_proteins_in_Escherichia_coli idu(3);Cyanate_hydrolysis; Belongs to the LysR transcriptional regulatory family.
  
     0.632
KIH84765.1
Glycine cleavage system transcriptional activator; Idu(4);Orphan_regulatory_proteins; Belongs to the LysR transcriptional regulatory family.
  
     0.608
KIH83728.1
Glycine cleavage system transcriptional activator; Idu(4);Orphan_regulatory_proteins; Belongs to the LysR transcriptional regulatory family.
  
     0.586
KIH83739.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.583
Your Current Organism:
Pseudomonas batumici
NCBI taxonomy Id: 226910
Other names: P. batumici, strain UCM B-321
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