STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIH83013.13,4-dihydroxyphenylacetate 2,3-dioxygenase; Isu;Aromatic_dioxygenase_mess isu;Aromatic_Amin_Catabolism icw(5);Aromatic_amino_acid_degradation icw(5);4-Hydroxyphenylacetic_acid_catabolic_pathway icw(3);Central_meta- cleavage_pathway_of_aromatic_compound_d egradation isu;Dioxygenases_. (285 aa)    
Predicted Functional Partners:
KIH83014.1
5-carboxymethyl-2-hydroxymuconate delta-isomerase; Icw(1);Aromatic_amino_acid_degradation icw(1);4-Hydroxyphenylacetic_acid_catabolic_pathway icw(2);Central_meta- cleavage_pathway_of_aromatic_compound_d egradation.
 
  
 0.997
KIH83016.1
2-oxo-hepta-3-ene-1,7-dioic acid hydratase; Isu;Aromatic_amino_acid_degradation isu;4-Hydroxyphenylacetic_acid_catabolic_pathway isu;Benzoate_transport_and_degradation_cluster isu;Central_meta- cleavage_pathway_of_aromatic_compound_degr adation.
 
  
 0.993
KIH83017.1
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Icw(5);Aromatic_amino_acid_degradation icw(6);4-Hydroxyphenylacetic_acid_catabolic_pathway; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.991
KIH83009.1
Transcriptional activator of 4-hydroxyphenylacetate 3-monooxygenase operon, XylS/AraC family; Icw(6);4- Hydroxyphenylacetic_acid_catabolic_pathway.
 
  
 0.963
KIH83011.1
Icw(2);Aromatic_amino_acid_degradation icw(3);Aromatic_amino_acid_degradation icw(2);4-Hydroxyphenylacetic_acid_catabolic_pathway icw(3);4-Hydroxyphenylacetic_acid_catabolic_pathway.
 
  
 0.927
KIH83012.1
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; Icw(6);Aromatic_amino_acid_degradation icw(7);4-Hydroxyphenylacetic_acid_catabolic_pathway icw(1);Central_meta- cleavage_pathway_of_aromatic_compound_d egradation; Belongs to the aldehyde dehydrogenase family.
 
 
 0.896
KIH83010.1
Icw(2);Aromatic_amino_acid_degradation icw(3);Aromatic_amino_acid_degradation icw(2);4-Hydroxyphenylacetic_acid_catabolic_pathway icw(3);4-Hydroxyphenylacetic_acid_catabolic_pathway.
 
  
 0.880
KIH83008.1
Homoprotocatechuate degradative operon repressor; Icw(3);Aromatic_amino_acid_degradation icw(3);4-Hydroxyphenylacetic_acid_catabolic_pathway.
 
   
 0.876
KIH83007.1
Isu;Anaerobic_respiratory_reductases isu;Anaerobic_respiratory_reductases.
 
  
 0.788
KIH83018.1
5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase; Icw(2);Aromatic_amino_acid_degradation icw(2);4-Hydroxyphenylacetic_acid_catabolic_pathway.
 
   
 0.782
Your Current Organism:
Pseudomonas batumici
NCBI taxonomy Id: 226910
Other names: P. batumici, strain UCM B-321
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