STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIH82822.1MFS transporter. (493 aa)    
Predicted Functional Partners:
KIH86030.1
BatY, batumin synthesis operon, long-chain-fatty-acid--CoA ligase; Idu(19);n-Phenylalkanoic_acid_degradation idu(19);Fatty_acid_metabolism_cluster idu(19);Biotin_synthesis_cluster idu(19);Biotin_biosynthesis.
  
 
 0.712
KIH82558.1
Long-chain-fatty-acid--CoA ligase; Idu(19);n-Phenylalkanoic_acid_degradation idu(19);Fatty_acid_metabolism_cluster idu(19);Biotin_synthesis_cluster idu(19);Biotin_biosynthesis.
    
 0.711
KIH80776.1
Phenylacetate-CoA oxygenase/reductase, PaaK subunit.
    
 0.682
KIH83336.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
 
 
  0.677
KIH83007.1
Isu;Anaerobic_respiratory_reductases isu;Anaerobic_respiratory_reductases.
    
 0.672
KIH81211.1
GbcB Glycine betaine demethylase subunit B; Icw(1);Choline_and_Betaine_Uptake_and_Betaine_Biosy n thesis icw(1);Niacin-Choline_transport_and_metabolism.
    
 0.672
xylB
Xylulose kinase; Isu;Xylose_utilization.
  
 
 0.670
KIH80452.1
Phenazine biosynthesis protein PhzE, 2-Amino-2-deoxy-isochorismate synthase.
    
  0.652
KIH83872.1
Long-chain-fatty-acid--CoA ligase; Idu(19);n-Phenylalkanoic_acid_degradation idu(19);Fatty_acid_metabolism_cluster idu(19);Biotin_synthesis_cluster idu(19);Biotin_biosynthesis.
    
 0.617
KIH82827.1
Exoenzymes regulatory protein AepA precursor.
 
     0.593
Your Current Organism:
Pseudomonas batumici
NCBI taxonomy Id: 226910
Other names: P. batumici, strain UCM B-321
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.