STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIH82691.1Ribose ABC transport system, permease protein RbsC; Icw(3);D-ribose_utilization; Belongs to the binding-protein-dependent transport system permease family. (325 aa)    
Predicted Functional Partners:
rbsD
Ribose ABC transport system, high affinity permease RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
 
 0.994
KIH82692.1
Ribose ABC transport system, ATP-binding protein RbsA; Icw(1);D-ribose_utilization.
 0.992
KIH82693.1
Ribose ABC transport system, periplasmic ribose-binding protein RbsB; Isu;D-ribose_utilization.
 
 0.991
KIH83571.1
Inositol transport system sugar-binding protein; Isu;Inositol_catabolism.
 0.980
rbsA
Inositol transport system ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.966
araG
L-arabinose transport ATP-binding protein AraG; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.
 0.966
KIH82690.1
Ribose operon repressor; Icw(2);D-ribose_utilization.
 
 
 0.954
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.946
KIH83333.1
Periplasmic sugar-binding domain protein.
 
 0.901
KIH81644.1
L-arabinose-binding periplasmic protein precursor AraF; Isu;L-Arabinose_utilization.
 
 0.884
Your Current Organism:
Pseudomonas batumici
NCBI taxonomy Id: 226910
Other names: P. batumici, strain UCM B-321
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