STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIH82481.1Putative oxygenase subunit. (360 aa)    
Predicted Functional Partners:
KIH86030.1
BatY, batumin synthesis operon, long-chain-fatty-acid--CoA ligase; Idu(19);n-Phenylalkanoic_acid_degradation idu(19);Fatty_acid_metabolism_cluster idu(19);Biotin_synthesis_cluster idu(19);Biotin_biosynthesis.
 
 0.872
KIH83872.1
Long-chain-fatty-acid--CoA ligase; Idu(19);n-Phenylalkanoic_acid_degradation idu(19);Fatty_acid_metabolism_cluster idu(19);Biotin_synthesis_cluster idu(19);Biotin_biosynthesis.
 
 0.847
KIH82458.1
Long-chain-fatty-acid--CoA ligase; Idu(19);n-Phenylalkanoic_acid_degradation idu(19);Fatty_acid_metabolism_cluster idu(19);Biotin_synthesis_cluster idu(19);Biotin_biosynthesis.
  
 0.767
KIH83522.1
Methionine aminopeptidase; Idu(2);CBSS-312309.3.peg.1965 idu(2);Translation_termination_factors_bacterial.
  
 
 0.765
KIH83007.1
Isu;Anaerobic_respiratory_reductases isu;Anaerobic_respiratory_reductases.
  
  
 0.761
KIH80776.1
Phenylacetate-CoA oxygenase/reductase, PaaK subunit.
    
 0.757
KIH84069.1
Long-chain-fatty-acid--CoA ligase; Idu(19);n-Phenylalkanoic_acid_degradation idu(19);Fatty_acid_metabolism_cluster idu(19);Biotin_synthesis_cluster idu(19);Biotin_biosynthesis.
 
 0.720
KIH82480.1
Hypothetical protein.
    
 0.718
KIH81788.1
Beta-carotene hydroxylase; Isu;Carotenoids isu;Myxoxanthophyll_biosynthesis_in_Cyanobacteria.
   
 0.711
KIH86233.1
Isoquinoline 1-oxidoreductase beta subunit; Idu(2);N-heterocyclic_aromatic_compound_degradation idu(2);CBSS-314267.3.peg.390.
     
 0.708
Your Current Organism:
Pseudomonas batumici
NCBI taxonomy Id: 226910
Other names: P. batumici, strain UCM B-321
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.