STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Coexpression
Experiments
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[Homology]
Score
mqo-2Malate:quinone oxidoreductase; Idu(1);TCA_Cycle. (502 aa)    
Predicted Functional Partners:
KIH82022.1
Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
   
 
 0.983
KIH84442.1
Citrate synthase (si); Icw(2);TCA_Cycle isu;Glyoxylate_bypass icw(2);Serine-glyoxylate_cycle; Belongs to the citrate synthase family.
    
 0.981
KIH84564.1
2-methylcitrate synthase; Icw(3);Methylcitrate_cycle icw(4);Propionate-CoA_to_Succinate_Module; Belongs to the citrate synthase family.
    
 0.980
fumC-2
Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
    
 0.975
ppc
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.
     
 0.961
KIH85722.1
NADP-dependent malic enzyme; Isu;Pyruvate_metabolism_I:_anaplerotic_reactions,_P EP.
    
 0.919
pckA
Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.
    
 0.915
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
   
 
 0.912
mqo
Malate:quinone oxidoreductase; Idu(1);TCA_Cycle.
  
  
 
0.905
KIH80741.1
Pyruvate carboxyl transferase subunit B; Icw(1);Pyruvate_metabolism_I:_anaplerotic_reactions , _PEP.
    
  0.904
Your Current Organism:
Pseudomonas batumici
NCBI taxonomy Id: 226910
Other names: P. batumici, strain UCM B-321
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