STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIH81248.1RhlA, 3-(3-hydroxyalkanoyloxy)alkanoic acids (HAAs) synthase. (279 aa)    
Predicted Functional Partners:
KIH82544.1
Acyl-CoA dehydrogenase, short-chain specific.
  
 0.979
KIH86030.1
BatY, batumin synthesis operon, long-chain-fatty-acid--CoA ligase; Idu(19);n-Phenylalkanoic_acid_degradation idu(19);Fatty_acid_metabolism_cluster idu(19);Biotin_synthesis_cluster idu(19);Biotin_biosynthesis.
  
 0.957
KIH83872.1
Long-chain-fatty-acid--CoA ligase; Idu(19);n-Phenylalkanoic_acid_degradation idu(19);Fatty_acid_metabolism_cluster idu(19);Biotin_synthesis_cluster idu(19);Biotin_biosynthesis.
  
 0.957
KIH82558.1
Long-chain-fatty-acid--CoA ligase; Idu(19);n-Phenylalkanoic_acid_degradation idu(19);Fatty_acid_metabolism_cluster idu(19);Biotin_synthesis_cluster idu(19);Biotin_biosynthesis.
  
 0.919
KIH86005.1
Idu(5);Fatty_Acid_Biosynthesis_FASII.
  
 0.906
KIH84069.1
Long-chain-fatty-acid--CoA ligase; Idu(19);n-Phenylalkanoic_acid_degradation idu(19);Fatty_acid_metabolism_cluster idu(19);Biotin_synthesis_cluster idu(19);Biotin_biosynthesis.
  
 0.905
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
  0.822
KIH82458.1
Long-chain-fatty-acid--CoA ligase; Idu(19);n-Phenylalkanoic_acid_degradation idu(19);Fatty_acid_metabolism_cluster idu(19);Biotin_synthesis_cluster idu(19);Biotin_biosynthesis.
   
 0.822
KIH80676.1
Non-ribosomal peptide synthetase module.
   
 0.814
apaH
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.800
Your Current Organism:
Pseudomonas batumici
NCBI taxonomy Id: 226910
Other names: P. batumici, strain UCM B-321
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