STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIH80584.1Hypothetical protein. (329 aa)    
Predicted Functional Partners:
KIH80583.1
Aspartyl/asparaginyl beta-hydroxylase; Dioxygenase.
 
     0.949
KIH80494.1
Aspartyl/asparaginyl beta-hydroxylase; Dioxygenase.
 
     0.786
KIH83149.1
Tryptophan 2-monooxygenase; Idu(1);Aromatic_amino_acid_degradation.
 
     0.706
KIH82549.1
Hypothetical protein.
  
 
   0.657
KIH80690.1
Acetyltransferase, GNAT family.
 
  
  0.649
KIH82543.1
Hypothetical protein.
  
     0.641
KIH80582.1
Outer membrane protein.
 
     0.640
metG
Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.639
KIH83872.1
Long-chain-fatty-acid--CoA ligase; Idu(19);n-Phenylalkanoic_acid_degradation idu(19);Fatty_acid_metabolism_cluster idu(19);Biotin_synthesis_cluster idu(19);Biotin_biosynthesis.
 
   
 0.616
KIH80428.1
Lysine-epsilon oxidase antimicrobial protein LodA.
  
     0.603
Your Current Organism:
Pseudomonas batumici
NCBI taxonomy Id: 226910
Other names: P. batumici, strain UCM B-321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.