STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIH80500.1Transcriptional regulator, MarR family. (152 aa)    
Predicted Functional Partners:
KIH80501.1
Icw(1);Multidrug_Resistance,_Tripartite_Systems_Fou nd_in_Gram_Negative_Bacteria.
 
   
 0.943
KIH80503.1
HlyD family secretion protein.
 
  
 0.928
KIH80502.1
Putative Membrane protein.
 
     0.911
KIH80504.1
Idu(5);Multidrug_Resistance,_Tripartite_Systems_Fou nd_in_Gram_Negative_Bacteria.
 
     0.805
KIH80590.1
Icw(1);Multidrug_Resistance,_Tripartite_Systems_Fou nd_in_Gram_Negative_Bacteria.
 
   
 0.759
KIH85133.1
Isu;Chitin_and_N-acetylglucosamine_utilization isu;Chitin_and_N-acetylglucosamine_utilization icw(1);Chitin_and_N-acetylglucosamine_utilization isu;Sialic_Acid_Metabolism isu;Sialic_Acid_Metabolism isu;Sialic_Acid_Metabolism.
     
 0.717
KIH81727.1
Hypothetical protein.
     
 0.717
KIH81731.1
PTS system, trehalose-specific IIB component / PTS system, trehalose-specific IIC component; Isu;Trehalose_Uptake_and_Utilization icw(2);Trehalose_Uptake_and_Utilization.
     
 0.717
KIH80592.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.695
KIH80591.1
Putative Membrane protein.
 
     0.623
Your Current Organism:
Pseudomonas batumici
NCBI taxonomy Id: 226910
Other names: P. batumici, strain UCM B-321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.