Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE40887.1 | SDE41054.1 | SAMN05421855_101475 | SAMN05421855_101480 | AAA domain-containing protein. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.498 |
SDE41054.1 | SDE40887.1 | SAMN05421855_101480 | SAMN05421855_101475 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | AAA domain-containing protein. | 0.498 |
SDE41054.1 | SDE43749.1 | SAMN05421855_101480 | SAMN05421855_101616 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | comF family protein. | 0.566 |
SDE41054.1 | SDE99431.1 | SAMN05421855_101480 | SAMN05421855_10477 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. | 0.526 |
SDE41054.1 | SDF23648.1 | SAMN05421855_101480 | SAMN05421855_11210 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | RteC protein. | 0.636 |
SDE41054.1 | apt | SAMN05421855_101480 | SAMN05421855_103238 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.558 |
SDE43749.1 | SDE41054.1 | SAMN05421855_101616 | SAMN05421855_101480 | comF family protein. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.566 |
SDE43749.1 | apt | SAMN05421855_101616 | SAMN05421855_103238 | comF family protein. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.660 |
SDE99431.1 | SDE41054.1 | SAMN05421855_10477 | SAMN05421855_101480 | Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.526 |
SDF23648.1 | SDE41054.1 | SAMN05421855_11210 | SAMN05421855_101480 | RteC protein. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.636 |
apt | SDE41054.1 | SAMN05421855_103238 | SAMN05421855_101480 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.558 |
apt | SDE43749.1 | SAMN05421855_103238 | SAMN05421855_101616 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | comF family protein. | 0.660 |