STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE67571.1Sulfate permease, SulP family. (549 aa)    
Predicted Functional Partners:
SDE67588.1
Protein of unknown function.
       0.664
SDE43804.1
Hypothetical protein.
    
 
 0.654
SDE50093.1
SH3 domain-containing protein.
    
 
 0.654
SDE50112.1
Hypothetical protein.
    
 
 0.654
SDE72199.1
Hypothetical protein.
    
   0.629
SDF30830.1
Concanavalin A-like lectin/glucanases superfamily protein.
    
   0.629
SDE30775.1
Carbonic anhydrase.
 
 
 0.574
SDE50817.1
Carbonic anhydrase.
 
 
 0.530
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
    
   0.511
SDE54685.1
Acyl carrier protein.
    
   0.511
Your Current Organism:
Ulvibacter litoralis
NCBI taxonomy Id: 227084
Other names: Bacteroidetes bacterium KMM 3912, CCUG 47093, DSM 16195, DSM 19843, KCTC 12104, KMM 3912, U. litoralis, Ulvibacter litoralis Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.