STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE72662.1Hypothetical protein. (100 aa)    
Predicted Functional Partners:
SDE72678.1
Hypothetical protein.
 
     0.874
SDE72649.1
Hypothetical protein.
       0.773
SDE79588.1
Hypothetical protein.
  
     0.639
SDE48209.1
Protein of unknown function.
  
     0.632
SDE72626.1
Iron complex outermembrane recepter protein.
       0.631
SDE70601.1
Iron complex transport system substrate-binding protein.
  
     0.629
SDF17016.1
Protein of unknown function.
  
     0.595
SDE72697.1
Protein of unknown function.
       0.552
SDE55467.1
Hypothetical protein.
  
     0.511
SDE53279.1
Aspartyl protease.
  
     0.458
Your Current Organism:
Ulvibacter litoralis
NCBI taxonomy Id: 227084
Other names: Bacteroidetes bacterium KMM 3912, CCUG 47093, DSM 16195, DSM 19843, KCTC 12104, KMM 3912, U. litoralis, Ulvibacter litoralis Nedashkovskaya et al. 2004
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.