STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF09393.1Nucleotide-binding universal stress protein, UspA family. (282 aa)    
Predicted Functional Partners:
SDF09287.1
Hypothetical protein.
 
     0.678
SDF09418.1
Nucleotide-binding universal stress protein, UspA family.
 
    
0.677
SDF09376.1
Nucleotide-binding universal stress protein, UspA family.
 
    
0.643
SDF09774.1
Hypothetical protein.
  
     0.630
SDF09335.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
 
  
 0.615
SDF09471.1
Metallo-beta-lactamase family protein.
  
    0.613
SDF09440.1
Restriction endonuclease.
  
    0.574
SDE41761.1
Threonine/homoserine/homoserine lactone efflux protein.
  
     0.571
SDF09310.1
PAS domain S-box-containing protein.
 
   
 0.555
SDF09351.1
Nucleotide-binding universal stress protein, UspA family.
 
    
0.539
Your Current Organism:
Ulvibacter litoralis
NCBI taxonomy Id: 227084
Other names: Bacteroidetes bacterium KMM 3912, CCUG 47093, DSM 16195, DSM 19843, KCTC 12104, KMM 3912, U. litoralis, Ulvibacter litoralis Nedashkovskaya et al. 2004
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.