STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF10015.1Hypothetical protein. (54 aa)    
Predicted Functional Partners:
SDF09987.1
Protein of unknown function.
 
     0.903
SDF09961.1
TIGR03643 family protein.
 
     0.788
SDF09937.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
       0.565
SDE47849.1
Surface protein.
  
     0.452
SDE99901.1
Hypothetical protein.
  
     0.426
SDF10035.1
Por secretion system C-terminal sorting domain-containing protein.
       0.420
SDE32551.1
Hypothetical protein.
  
     0.419
SDE93663.1
Methyltransferase domain-containing protein.
  
     0.413
Your Current Organism:
Ulvibacter litoralis
NCBI taxonomy Id: 227084
Other names: Bacteroidetes bacterium KMM 3912, CCUG 47093, DSM 16195, DSM 19843, KCTC 12104, KMM 3912, U. litoralis, Ulvibacter litoralis Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.