STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF31952.1Hypothetical protein. (192 aa)    
Predicted Functional Partners:
SDE42912.1
Gliding motility-associated lipoprotein GldD.
  
   
 0.794
SDE36715.1
Gliding motility associated protien GldN.
 
   
 0.767
SDE86332.1
Gliding motility-associated lipoprotein GldB.
  
   
 0.739
SDE46629.1
Gliding motility-associated lipoprotein GldH.
  
   
 0.731
SDE87485.1
Protein of unknown function.
  
     0.690
SDE36787.1
Gliding motility-associated lipoprotein GldK.
  
   
 0.689
SDF02610.1
Gliding-associated putative ABC transporter substrate-binding component GldG.
  
   
 0.688
SDE55284.1
Cell surface protein SprA.
  
   
 0.687
SDE64718.1
Protein of unknown function.
  
     0.661
SDE46458.1
Hypothetical protein.
  
     0.620
Your Current Organism:
Ulvibacter litoralis
NCBI taxonomy Id: 227084
Other names: Bacteroidetes bacterium KMM 3912, CCUG 47093, DSM 16195, DSM 19843, KCTC 12104, KMM 3912, U. litoralis, Ulvibacter litoralis Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.