STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL44152.1Putative ABC transport system ATP-binding protein. (234 aa)    
Predicted Functional Partners:
SCL44151.1
Hypothetical protein.
 
  0.971
SCL66775.1
Putative ABC transport system permease protein.
  0.969
SCL44154.1
Putative ABC transport system permease protein.
 
  0.967
SCL45627.1
Putative ABC transport system permease protein.
  0.862
SCL46959.1
Putative ABC transport system permease protein.
  
  0.676
SCL47828.1
FtsX-like permease family protein.
   
  0.667
SCL47832.1
Putative ABC transport system permease protein.
   
  0.667
SCL58686.1
Putative ABC transport system permease protein.
   
  0.667
SCL48258.1
Outer membrane lipoprotein-sorting protein.
   
 
 0.663
SCL66782.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.635
Your Current Organism:
Micromonospora eburnea
NCBI taxonomy Id: 227316
Other names: DSM 44814, JCM 12345, M. eburnea, Micromonospora eburnea Thawai et al. 2005, Micromonospora sp. LK2-10, Micromonospora sp. LK2-5, Micromonospora sp. LK210, NBRC 101912, PCU 238, PCU:238, strain LK2-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.