STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL44674.1Hypothetical protein. (188 aa)    
Predicted Functional Partners:
SCL44672.1
Nucleotidyl transferase AbiEii toxin, Type IV TA system.
 
     0.949
SCL45224.1
Hypothetical protein.
  
     0.724
SCL62424.1
Hypothetical protein.
  
     0.708
SCL48277.1
Hypothetical protein.
  
     0.696
SCL48693.1
Hypothetical protein.
  
     0.680
SCL44972.1
Hypothetical protein.
  
     0.679
SCL51535.1
Arylsulfatase A.
  
     0.676
SCL63797.1
Hypothetical protein.
  
     0.657
SCL63848.1
Glyoxalase-like domain-containing protein.
  
     0.653
SCL45706.1
Helix-hairpin-helix motif-containing protein.
  
     0.649
Your Current Organism:
Micromonospora eburnea
NCBI taxonomy Id: 227316
Other names: DSM 44814, JCM 12345, M. eburnea, Micromonospora eburnea Thawai et al. 2005, Micromonospora sp. LK2-10, Micromonospora sp. LK2-5, Micromonospora sp. LK210, NBRC 101912, PCU 238, PCU:238, strain LK2-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.