Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL44780.1 | SCL44782.1 | GA0070604_0600 | GA0070604_0601 | Uncharacterized membrane protein. | Mg/Co/Ni transporter MgtE (contains CBS domain). | 0.958 |
SCL44780.1 | SCL44784.1 | GA0070604_0600 | GA0070604_0602 | Uncharacterized membrane protein. | Trans-2,3-dihydro-3-hydroxyanthranilate isomerase. | 0.632 |
SCL44780.1 | SCL44786.1 | GA0070604_0600 | GA0070604_0603 | Uncharacterized membrane protein. | Hypothetical protein. | 0.546 |
SCL44782.1 | SCL44780.1 | GA0070604_0601 | GA0070604_0600 | Mg/Co/Ni transporter MgtE (contains CBS domain). | Uncharacterized membrane protein. | 0.958 |
SCL44782.1 | SCL44784.1 | GA0070604_0601 | GA0070604_0602 | Mg/Co/Ni transporter MgtE (contains CBS domain). | Trans-2,3-dihydro-3-hydroxyanthranilate isomerase. | 0.630 |
SCL44782.1 | SCL44786.1 | GA0070604_0601 | GA0070604_0603 | Mg/Co/Ni transporter MgtE (contains CBS domain). | Hypothetical protein. | 0.546 |
SCL44784.1 | SCL44780.1 | GA0070604_0602 | GA0070604_0600 | Trans-2,3-dihydro-3-hydroxyanthranilate isomerase. | Uncharacterized membrane protein. | 0.632 |
SCL44784.1 | SCL44782.1 | GA0070604_0602 | GA0070604_0601 | Trans-2,3-dihydro-3-hydroxyanthranilate isomerase. | Mg/Co/Ni transporter MgtE (contains CBS domain). | 0.630 |
SCL44784.1 | SCL44786.1 | GA0070604_0602 | GA0070604_0603 | Trans-2,3-dihydro-3-hydroxyanthranilate isomerase. | Hypothetical protein. | 0.605 |
SCL44784.1 | SCL45854.1 | GA0070604_0602 | GA0070604_1128 | Trans-2,3-dihydro-3-hydroxyanthranilate isomerase. | N-carbamoyl-L-amino-acid hydrolase. | 0.464 |
SCL44784.1 | SCL60383.1 | GA0070604_0602 | GA0070604_4287 | Trans-2,3-dihydro-3-hydroxyanthranilate isomerase. | Phenazine biosynthesis protein phzE. | 0.408 |
SCL44784.1 | lysA | GA0070604_0602 | GA0070604_5306 | Trans-2,3-dihydro-3-hydroxyanthranilate isomerase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.592 |
SCL44786.1 | SCL44780.1 | GA0070604_0603 | GA0070604_0600 | Hypothetical protein. | Uncharacterized membrane protein. | 0.546 |
SCL44786.1 | SCL44782.1 | GA0070604_0603 | GA0070604_0601 | Hypothetical protein. | Mg/Co/Ni transporter MgtE (contains CBS domain). | 0.546 |
SCL44786.1 | SCL44784.1 | GA0070604_0603 | GA0070604_0602 | Hypothetical protein. | Trans-2,3-dihydro-3-hydroxyanthranilate isomerase. | 0.605 |
SCL45854.1 | SCL44784.1 | GA0070604_1128 | GA0070604_0602 | N-carbamoyl-L-amino-acid hydrolase. | Trans-2,3-dihydro-3-hydroxyanthranilate isomerase. | 0.464 |
SCL45854.1 | lysA | GA0070604_1128 | GA0070604_5306 | N-carbamoyl-L-amino-acid hydrolase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.611 |
SCL60383.1 | SCL44784.1 | GA0070604_4287 | GA0070604_0602 | Phenazine biosynthesis protein phzE. | Trans-2,3-dihydro-3-hydroxyanthranilate isomerase. | 0.408 |
lysA | SCL44784.1 | GA0070604_5306 | GA0070604_0602 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | Trans-2,3-dihydro-3-hydroxyanthranilate isomerase. | 0.592 |
lysA | SCL45854.1 | GA0070604_5306 | GA0070604_1128 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | N-carbamoyl-L-amino-acid hydrolase. | 0.611 |