Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL44787.1 | SCL44789.1 | GA0070604_0604 | GA0070604_0605 | Putative hydrolase of the HAD superfamily. | Threonine/homoserine efflux transporter RhtA. | 0.634 |
SCL44787.1 | SCL44791.1 | GA0070604_0604 | GA0070604_0606 | Putative hydrolase of the HAD superfamily. | Amino acid/polyamine/organocation transporter, APC superfamily. | 0.408 |
SCL44789.1 | SCL44787.1 | GA0070604_0605 | GA0070604_0604 | Threonine/homoserine efflux transporter RhtA. | Putative hydrolase of the HAD superfamily. | 0.634 |
SCL44789.1 | SCL44791.1 | GA0070604_0605 | GA0070604_0606 | Threonine/homoserine efflux transporter RhtA. | Amino acid/polyamine/organocation transporter, APC superfamily. | 0.563 |
SCL44789.1 | SCL44794.1 | GA0070604_0605 | GA0070604_0608 | Threonine/homoserine efflux transporter RhtA. | Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | 0.650 |
SCL44789.1 | SCL49518.1 | GA0070604_0605 | GA0070604_1929 | Threonine/homoserine efflux transporter RhtA. | Hypothetical protein. | 0.429 |
SCL44789.1 | SCL55019.1 | GA0070604_0605 | GA0070604_3120 | Threonine/homoserine efflux transporter RhtA. | Xaa-Pro aminopeptidase. | 0.400 |
SCL44791.1 | SCL44787.1 | GA0070604_0606 | GA0070604_0604 | Amino acid/polyamine/organocation transporter, APC superfamily. | Putative hydrolase of the HAD superfamily. | 0.408 |
SCL44791.1 | SCL44789.1 | GA0070604_0606 | GA0070604_0605 | Amino acid/polyamine/organocation transporter, APC superfamily. | Threonine/homoserine efflux transporter RhtA. | 0.563 |
SCL44794.1 | SCL44789.1 | GA0070604_0608 | GA0070604_0605 | Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | Threonine/homoserine efflux transporter RhtA. | 0.650 |
SCL49518.1 | SCL44789.1 | GA0070604_1929 | GA0070604_0605 | Hypothetical protein. | Threonine/homoserine efflux transporter RhtA. | 0.429 |
SCL55019.1 | SCL44789.1 | GA0070604_3120 | GA0070604_0605 | Xaa-Pro aminopeptidase. | Threonine/homoserine efflux transporter RhtA. | 0.400 |