STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL44825.1Hypothetical protein. (228 aa)    
Predicted Functional Partners:
SCL48313.1
Streptomyces sporulation and cell division protein, SsgA.
  
     0.718
SCL61605.1
Trp region conserved hypothetical membrane protein.
  
     0.682
SCL65248.1
Serine/threonine-protein kinase RsbW.
  
     0.677
SCL44387.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
     0.674
SCL44823.1
tRNA G18 (ribose-2'-O)-methylase SpoU.
       0.670
SCL44826.1
Hypothetical protein.
       0.664
SCL44828.1
PH domain-containing protein.
       0.659
SCL62049.1
Hypothetical protein.
  
     0.644
SCL44777.1
Sec-independent protein translocase protein TatB.
  
     0.618
SCL63895.1
DNA binding domain-containing protein, excisionase family.
  
     0.604
Your Current Organism:
Micromonospora eburnea
NCBI taxonomy Id: 227316
Other names: DSM 44814, JCM 12345, M. eburnea, Micromonospora eburnea Thawai et al. 2005, Micromonospora sp. LK2-10, Micromonospora sp. LK2-5, Micromonospora sp. LK210, NBRC 101912, PCU 238, PCU:238, strain LK2-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.