STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL45750.1Signal transduction histidine kinase. (425 aa)    
Predicted Functional Partners:
SCL44195.1
Signal transduction histidine kinase.
  
 0.986
SCL45752.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.972
SCL68095.1
PAS/PAC sensor signal transduction histidine kinase.
 
 
 0.864
SCL49257.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
  0.850
SCL66651.1
Multi-sensor signal transduction histidine kinase.
    
 0.781
SCL45766.1
Hypothetical protein.
 
     0.762
SCL45638.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
  0.699
SCL47703.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
  0.695
SCL63142.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
  0.673
SCL54255.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
  0.665
Your Current Organism:
Micromonospora eburnea
NCBI taxonomy Id: 227316
Other names: DSM 44814, JCM 12345, M. eburnea, Micromonospora eburnea Thawai et al. 2005, Micromonospora sp. LK2-10, Micromonospora sp. LK2-5, Micromonospora sp. LK210, NBRC 101912, PCU 238, PCU:238, strain LK2-10
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