STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL46442.1Peptidase_C39 like family protein. (211 aa)    
Predicted Functional Partners:
SCL45224.1
Hypothetical protein.
  
 
   0.794
SCL44280.1
Hypothetical protein.
  
    0.705
SCL51535.1
Arylsulfatase A.
  
     0.686
SCL44282.1
Hypothetical protein.
  
    0.678
SCL54400.1
Component of the Tol biopolymer transport system.
  
 0.670
SCL68492.1
WD40-like Beta Propeller Repeat.
  
 0.670
SCL63848.1
Glyoxalase-like domain-containing protein.
  
     0.646
SCL45329.1
Sporulation and spore germination.
  
     0.642
SCL54838.1
Cytochrome c oxidase subunit 3.
   
 
  0.631
SCL43905.1
Hypothetical protein.
  
 
   0.618
Your Current Organism:
Micromonospora eburnea
NCBI taxonomy Id: 227316
Other names: DSM 44814, JCM 12345, M. eburnea, Micromonospora eburnea Thawai et al. 2005, Micromonospora sp. LK2-10, Micromonospora sp. LK2-5, Micromonospora sp. LK210, NBRC 101912, PCU 238, PCU:238, strain LK2-10
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.