STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL48267.1Signal transduction histidine kinase. (506 aa)    
Predicted Functional Partners:
SCL44195.1
Signal transduction histidine kinase.
 
0.982
SCL48262.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
  0.980
SCL66651.1
Multi-sensor signal transduction histidine kinase.
   
0.970
SCL54454.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
  0.873
SCL63142.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
  0.860
SCL47703.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
  0.858
SCL65145.1
Two-component system, OmpR family, response regulator.
  
  0.858
SCL62769.1
2-oxoisovalerate dehydrogenase E1 component.
    
 0.857
SCL49257.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
  0.855
SCL52668.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
  0.854
Your Current Organism:
Micromonospora eburnea
NCBI taxonomy Id: 227316
Other names: DSM 44814, JCM 12345, M. eburnea, Micromonospora eburnea Thawai et al. 2005, Micromonospora sp. LK2-10, Micromonospora sp. LK2-5, Micromonospora sp. LK210, NBRC 101912, PCU 238, PCU:238, strain LK2-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.