Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL45999.1 | SCL46002.1 | GA0070604_1164 | GA0070604_1165 | MarR family protein. | Putative adhesin. | 0.894 |
SCL45999.1 | SCL50662.1 | GA0070604_1164 | GA0070604_2184 | MarR family protein. | NB-ARC domain-containing protein. | 0.521 |
SCL46002.1 | SCL45999.1 | GA0070604_1165 | GA0070604_1164 | Putative adhesin. | MarR family protein. | 0.894 |
SCL46002.1 | SCL50662.1 | GA0070604_1165 | GA0070604_2184 | Putative adhesin. | NB-ARC domain-containing protein. | 0.497 |
SCL50662.1 | SCL45999.1 | GA0070604_2184 | GA0070604_1164 | NB-ARC domain-containing protein. | MarR family protein. | 0.521 |
SCL50662.1 | SCL46002.1 | GA0070604_2184 | GA0070604_1165 | NB-ARC domain-containing protein. | Putative adhesin. | 0.497 |
SCL50662.1 | SCL53011.1 | GA0070604_2184 | GA0070604_2687 | NB-ARC domain-containing protein. | Sugar-specific transcriptional regulator TrmB. | 0.409 |
SCL50662.1 | SCL56047.1 | GA0070604_2184 | GA0070604_3332 | NB-ARC domain-containing protein. | TIGR03083 family protein. | 0.463 |
SCL50662.1 | SCL59255.1 | GA0070604_2184 | GA0070604_4014 | NB-ARC domain-containing protein. | DNA-binding transcriptional activator of the SARP family. | 0.464 |
SCL50662.1 | SCL59894.1 | GA0070604_2184 | GA0070604_4167 | NB-ARC domain-containing protein. | DNA-binding transcriptional activator of the SARP family. | 0.455 |
SCL50662.1 | SCL66539.1 | GA0070604_2184 | GA0070604_5718 | NB-ARC domain-containing protein. | DNA-binding transcriptional activator of the SARP family. | 0.403 |
SCL53011.1 | SCL50662.1 | GA0070604_2687 | GA0070604_2184 | Sugar-specific transcriptional regulator TrmB. | NB-ARC domain-containing protein. | 0.409 |
SCL56047.1 | SCL50662.1 | GA0070604_3332 | GA0070604_2184 | TIGR03083 family protein. | NB-ARC domain-containing protein. | 0.463 |
SCL59255.1 | SCL50662.1 | GA0070604_4014 | GA0070604_2184 | DNA-binding transcriptional activator of the SARP family. | NB-ARC domain-containing protein. | 0.464 |
SCL59894.1 | SCL50662.1 | GA0070604_4167 | GA0070604_2184 | DNA-binding transcriptional activator of the SARP family. | NB-ARC domain-containing protein. | 0.455 |
SCL66539.1 | SCL50662.1 | GA0070604_5718 | GA0070604_2184 | DNA-binding transcriptional activator of the SARP family. | NB-ARC domain-containing protein. | 0.403 |