STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL51836.1Protein N-acetyltransferase, RimJ/RimL family. (176 aa)    
Predicted Functional Partners:
SCL63075.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.713
SCL65206.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.675
SCL51091.1
Phosphotransferase enzyme family protein.
  
 
  0.626
SCL61563.1
Glutamate synthase (NADH) large subunit.
   
 
  0.573
SCL49350.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.568
SCL56051.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.567
SCL53691.1
Lysine N6-hydroxylase.
   
 
 0.536
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
    
  0.496
SCL46736.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.474
SCL49489.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.455
Your Current Organism:
Micromonospora eburnea
NCBI taxonomy Id: 227316
Other names: DSM 44814, JCM 12345, M. eburnea, Micromonospora eburnea Thawai et al. 2005, Micromonospora sp. LK2-10, Micromonospora sp. LK2-5, Micromonospora sp. LK210, NBRC 101912, PCU 238, PCU:238, strain LK2-10
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