STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL54203.1Transcriptional regulator, GntR family. (256 aa)    
Predicted Functional Partners:
SCL59161.1
Transcriptional regulator, GntR family.
  
     0.771
SCL44171.1
Transcriptional regulator, GntR family.
  
  
 0.619
SCL57733.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.594
SCL46263.1
Acetolactate synthase, small subunit.
  
    0.581
SCL53811.1
Transcriptional regulator, IclR family.
  
    0.550
SCL53851.1
Transcriptional regulator, IclR family.
  
    0.526
SCL46918.1
Transcriptional regulator, GntR family.
  
  
 0.523
SCL45786.1
Transcriptional regulator, IclR family.
  
    0.504
SCL54164.1
Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family; Belongs to the LDH2/MDH2 oxidoreductase family.
 
     0.497
SCL50538.1
Transcriptional regulator, IclR family.
  
    0.471
Your Current Organism:
Micromonospora eburnea
NCBI taxonomy Id: 227316
Other names: DSM 44814, JCM 12345, M. eburnea, Micromonospora eburnea Thawai et al. 2005, Micromonospora sp. LK2-10, Micromonospora sp. LK2-5, Micromonospora sp. LK210, NBRC 101912, PCU 238, PCU:238, strain LK2-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.