STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL54589.1Fructuronate reductase; Belongs to the mannitol dehydrogenase family. (496 aa)    
Predicted Functional Partners:
uxaC
Glucuronate isomerase.
 
 
 0.998
SCL54594.1
L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 0.910
SCL56011.1
D-mannonate dehydratase.
 
  
 0.905
SCL54604.1
Oxidoreductase family, C-terminal alpha/beta domain.
       0.817
SCL54584.1
Predicted dehydrogenase.
       0.787
SCL56021.1
Galactonate dehydratase.
 
  
 0.779
SCL60927.1
Fructokinase.
 
  
 0.777
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
    
 0.772
pfp
Pyrophosphate-dependent phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.
    
 0.759
SCL45304.1
Mannose-6-phosphate isomerase, type 1.
    
 0.754
Your Current Organism:
Micromonospora eburnea
NCBI taxonomy Id: 227316
Other names: DSM 44814, JCM 12345, M. eburnea, Micromonospora eburnea Thawai et al. 2005, Micromonospora sp. LK2-10, Micromonospora sp. LK2-5, Micromonospora sp. LK210, NBRC 101912, PCU 238, PCU:238, strain LK2-10
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