STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL54874.1FAD/FMN-containing dehydrogenase. (1034 aa)    
Predicted Functional Partners:
SCL61563.1
Glutamate synthase (NADH) large subunit.
    
 0.978
SCL53825.1
L-lactate dehydrogenase complex protein LldF.
  
 0.940
SCL54838.1
Cytochrome c oxidase subunit 3.
    
 0.939
SCL54869.1
Pyruvate oxidase; Belongs to the TPP enzyme family.
 
 
 0.923
SCL48840.1
Succinate dehydrogenase subunit B.
  
 0.899
SCL54879.1
L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
     0.894
SCL57241.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 
 0.888
SCL65206.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.883
SCL54829.1
Cytochrome c oxidase subunit 2.
 
  
 0.881
SCL65687.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
   
 0.871
Your Current Organism:
Micromonospora eburnea
NCBI taxonomy Id: 227316
Other names: DSM 44814, JCM 12345, M. eburnea, Micromonospora eburnea Thawai et al. 2005, Micromonospora sp. LK2-10, Micromonospora sp. LK2-5, Micromonospora sp. LK210, NBRC 101912, PCU 238, PCU:238, strain LK2-10
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