STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL56412.1Hypothetical protein. (202 aa)    
Predicted Functional Partners:
SCL56418.1
Inorganic phosphate transporter, PiT family.
 
  
 0.970
SCL67028.1
Inorganic phosphate transporter, PiT family.
  
  
 0.805
SCL56438.1
Xylulokinase.
 
     0.544
SCL56378.1
Right handed beta helix region.
 
     0.538
SCL56423.1
Sugar (pentulose or hexulose) kinase.
 
     0.535
SCL56432.1
Transcriptional regulator, DeoR family.
 
     0.535
SCL56443.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.478
SCL56404.1
Glycerophosphoryl diester phosphodiesterase.
  
  
 0.469
SCL56428.1
Probable phosphoglycerate mutase.
       0.469
SCL49674.1
Guanylate kinase.
   
    0.448
Your Current Organism:
Micromonospora eburnea
NCBI taxonomy Id: 227316
Other names: DSM 44814, JCM 12345, M. eburnea, Micromonospora eburnea Thawai et al. 2005, Micromonospora sp. LK2-10, Micromonospora sp. LK2-5, Micromonospora sp. LK210, NBRC 101912, PCU 238, PCU:238, strain LK2-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.