STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL58655.1MFS transporter, NNP family, nitrate/nitrite transporter. (450 aa)    
Predicted Functional Partners:
SCL58683.1
Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.996
SCL58651.1
MFS transporter, NNP family, nitrate/nitrite transporter.
  
0.993
SCL58680.1
Respiratory nitrate reductase beta subunit.
 
 
 0.993
SCL58673.1
Nitrate reductase gamma subunit.
 
 
 0.991
SCL58677.1
Respiratory nitrate reductase chaperone NarJ.
 
  
 0.970
SCL64318.1
CBS domain-containing protein.
   
  
 0.791
SCL48106.1
Hypothetical protein.
   
  
 0.787
SCL51200.1
Nitroreductase family protein.
   
  
 0.787
SCL51897.1
Zn-dependent protease (includes SpoIVFB); Belongs to the peptidase M50B family.
   
    0.785
SCL48090.1
Nitroreductase family.
   
    0.784
Your Current Organism:
Micromonospora eburnea
NCBI taxonomy Id: 227316
Other names: DSM 44814, JCM 12345, M. eburnea, Micromonospora eburnea Thawai et al. 2005, Micromonospora sp. LK2-10, Micromonospora sp. LK2-5, Micromonospora sp. LK210, NBRC 101912, PCU 238, PCU:238, strain LK2-10
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