STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL59601.1Predicted kinase, aminoglycoside phosphotransferase (APT) family. (309 aa)    
Predicted Functional Partners:
SCL47506.1
Acyl-CoA synthetase (NDP forming).
    
  0.703
SCL47725.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.637
SCL57241.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
   
 
 0.583
SCL63955.1
Acetyltransferase (GNAT) domain-containing protein.
  
 
  0.535
SCL59595.1
NAD(P)H dehydrogenase (quinone); Belongs to the WrbA family.
 
     0.523
SCL57902.1
Methylthioribose-1-phosphate isomerase; Belongs to the eIF-2B alpha/beta/delta subunits family.
  
 
  0.505
SCL43883.1
Ribosomal-protein-alanine N-acetyltransferase.
  
 
  0.498
SCL55481.1
Acetyltransferase (GNAT) family protein.
  
 
  0.468
SCL53308.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase C.
  
 0.432
SCL56923.1
Acyl transferase domain-containing protein.
  
 0.432
Your Current Organism:
Micromonospora eburnea
NCBI taxonomy Id: 227316
Other names: DSM 44814, JCM 12345, M. eburnea, Micromonospora eburnea Thawai et al. 2005, Micromonospora sp. LK2-10, Micromonospora sp. LK2-5, Micromonospora sp. LK210, NBRC 101912, PCU 238, PCU:238, strain LK2-10
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