STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL59951.1Predicted dehydrogenase. (338 aa)    
Predicted Functional Partners:
SCL59946.1
Oxidase EvaA.
 
  
 0.926
SCL48593.1
Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
 
 
  0.797
SCL59941.1
UDP:flavonoid glycosyltransferase YjiC, YdhE family.
       0.768
SCL59956.1
NAD dependent epimerase/dehydratase family protein.
  
    0.743
SCL60096.1
L-glutamine:scyllo-inosose aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
  0.691
SCL51602.1
Predicted dehydrogenase.
  
     0.687
SCL65014.1
Predicted dehydrogenase.
  
     0.682
SCL45616.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
  0.681
SCL60061.1
Predicted dehydrogenase.
  
     0.670
SCL59915.1
CDP-6-deoxy-D-xylo-4-hexulose-3-dehydrase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
  0.668
Your Current Organism:
Micromonospora eburnea
NCBI taxonomy Id: 227316
Other names: DSM 44814, JCM 12345, M. eburnea, Micromonospora eburnea Thawai et al. 2005, Micromonospora sp. LK2-10, Micromonospora sp. LK2-5, Micromonospora sp. LK210, NBRC 101912, PCU 238, PCU:238, strain LK2-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.