Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL45377.1 | SCL45850.1 | GA0070604_0934 | GA0070604_1127 | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Formiminoglutamate deiminase. | 0.658 |
SCL45377.1 | SCL60434.1 | GA0070604_0934 | GA0070604_4296 | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Xanthine dehydrogenase accessory factor. | 0.707 |
SCL45377.1 | SCL68500.1 | GA0070604_0934 | GA0070604_6318 | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Hypothetical protein. | 0.658 |
SCL45850.1 | SCL45377.1 | GA0070604_1127 | GA0070604_0934 | Formiminoglutamate deiminase. | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | 0.658 |
SCL45850.1 | SCL60434.1 | GA0070604_1127 | GA0070604_4296 | Formiminoglutamate deiminase. | Xanthine dehydrogenase accessory factor. | 0.692 |
SCL45850.1 | SCL60439.1 | GA0070604_1127 | GA0070604_4297 | Formiminoglutamate deiminase. | Xanthine dehydrogenase YagT iron-sulfur-binding subunit. | 0.671 |
SCL45850.1 | SCL60444.1 | GA0070604_1127 | GA0070604_4298 | Formiminoglutamate deiminase. | Xanthine dehydrogenase YagS FAD-binding subunit. | 0.604 |
SCL45850.1 | SCL60448.1 | GA0070604_1127 | GA0070604_4299 | Formiminoglutamate deiminase. | Xanthine dehydrogenase YagR molybdenum-binding subunit. | 0.610 |
SCL46142.1 | SCL60434.1 | GA0070604_1200 | GA0070604_4296 | Cysteine desulfurase. | Xanthine dehydrogenase accessory factor. | 0.729 |
SCL46142.1 | SCL62213.1 | GA0070604_1200 | GA0070604_4690 | Cysteine desulfurase. | Cysteine desulfurase. | 0.904 |
SCL60429.1 | SCL60434.1 | GA0070604_4295 | GA0070604_4296 | Nicotine blue oxidoreductase. | Xanthine dehydrogenase accessory factor. | 0.983 |
SCL60429.1 | SCL60439.1 | GA0070604_4295 | GA0070604_4297 | Nicotine blue oxidoreductase. | Xanthine dehydrogenase YagT iron-sulfur-binding subunit. | 0.945 |
SCL60429.1 | SCL60444.1 | GA0070604_4295 | GA0070604_4298 | Nicotine blue oxidoreductase. | Xanthine dehydrogenase YagS FAD-binding subunit. | 0.934 |
SCL60429.1 | SCL60448.1 | GA0070604_4295 | GA0070604_4299 | Nicotine blue oxidoreductase. | Xanthine dehydrogenase YagR molybdenum-binding subunit. | 0.930 |
SCL60434.1 | SCL45377.1 | GA0070604_4296 | GA0070604_0934 | Xanthine dehydrogenase accessory factor. | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | 0.707 |
SCL60434.1 | SCL45850.1 | GA0070604_4296 | GA0070604_1127 | Xanthine dehydrogenase accessory factor. | Formiminoglutamate deiminase. | 0.692 |
SCL60434.1 | SCL46142.1 | GA0070604_4296 | GA0070604_1200 | Xanthine dehydrogenase accessory factor. | Cysteine desulfurase. | 0.729 |
SCL60434.1 | SCL60429.1 | GA0070604_4296 | GA0070604_4295 | Xanthine dehydrogenase accessory factor. | Nicotine blue oxidoreductase. | 0.983 |
SCL60434.1 | SCL60439.1 | GA0070604_4296 | GA0070604_4297 | Xanthine dehydrogenase accessory factor. | Xanthine dehydrogenase YagT iron-sulfur-binding subunit. | 0.974 |
SCL60434.1 | SCL60444.1 | GA0070604_4296 | GA0070604_4298 | Xanthine dehydrogenase accessory factor. | Xanthine dehydrogenase YagS FAD-binding subunit. | 0.991 |
page 1 of 3