STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL60762.1Xaa-Pro aminopeptidase. (393 aa)    
Predicted Functional Partners:
SCL60756.1
Proline iminopeptidase.
 
 
   0.938
SCL60742.1
Membrane dipeptidase.
 
    0.914
SCL60781.1
Membrane dipeptidase.
 
    0.860
SCL60766.1
Peptide/nickel transport system permease protein.
 
    0.846
SCL60776.1
Peptide/nickel transport system substrate-binding protein.
 
     0.789
SCL60752.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
    0.775
SCL60746.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.773
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
    
  0.696
SCL62868.1
Creatinine amidohydrolase.
  
  
  0.691
SCL57157.1
Glycine/D-amino acid oxidase.
  
 
  0.673
Your Current Organism:
Micromonospora eburnea
NCBI taxonomy Id: 227316
Other names: DSM 44814, JCM 12345, M. eburnea, Micromonospora eburnea Thawai et al. 2005, Micromonospora sp. LK2-10, Micromonospora sp. LK2-5, Micromonospora sp. LK210, NBRC 101912, PCU 238, PCU:238, strain LK2-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.