STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL61458.1Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-); Belongs to the bacterial solute-binding protein 3 family. (301 aa)    
Predicted Functional Partners:
SCL61455.1
Amino acid ABC transporter membrane protein, PAAT family.
 
  0.997
SCL61450.1
Polar amino acid transport system ATP-binding protein.
 
  0.988
SCL58329.1
Amino acid ABC transporter membrane protein, PAAT family.
 
  0.943
SCL58332.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
  0.942
SCL49763.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
  0.926
SCL53532.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
  0.920
SCL47352.1
Amino acid ABC transporter membrane protein 1, PAAT family.
  
  0.917
SCL47363.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
  0.914
SCL47348.1
Amino acid ABC transporter membrane protein 2, PAAT family.
  
  0.912
SCL53537.1
Polar amino acid transport system permease protein.
 
  0.849
Your Current Organism:
Micromonospora eburnea
NCBI taxonomy Id: 227316
Other names: DSM 44814, JCM 12345, M. eburnea, Micromonospora eburnea Thawai et al. 2005, Micromonospora sp. LK2-10, Micromonospora sp. LK2-5, Micromonospora sp. LK210, NBRC 101912, PCU 238, PCU:238, strain LK2-10
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